Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rtec protein | EAI98_15135 | Not Available | Positive | 3416556 - 3416823 | 10656.0 |
| atp-dependent dna helicase recg | EAI98_15140 | Not Available | Positive | 3416964 - 3418361 | 52690.5 |
| hypothetical protein | EAI98_15145 | Not Available | Negative | 3418724 - 3419149 | 15516.6 |
| hypothetical protein | EAI98_15150 | Not Available | Positive | 3419344 - 3420274 | 34453.6 |
| phosphoadenosine phosphosulfate reductase | EAI98_15155 | Not Available | Positive | 3420354 - 3421460 | 42748.0 |
| excisionase | EAI98_15160 | Not Available | Negative | 3421979 - 3422047 | 2669.42 |
| hypothetical protein | EAI98_15165 | Not Available | Negative | 3422227 - 3422931 | 26249.7 |
| site-specific integrase | EAI98_15170 | Not Available | Negative | 3423131 - 3423648 | 19474.8 |
| hypothetical protein | EAI98_15175 | Not Available | Negative | 3423649 - 3423839 | 6998.51 |
| nucleotidyltransferase domain-containing protein | EAI98_15180 | Not Available | Positive | 3424958 - 3425316 | 13952.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
