Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1080 domain-containing protein | EAI98_01335 | Not Available | Negative | 312708 - 314015 | 49411.7 |
| hypothetical protein | EAI98_01340 | Not Available | Negative | 314302 - 315966 | 63819.0 |
| glycerophosphodiester phosphodiesterase | EAI98_01345 | Not Available | Negative | 316195 - 317136 | 33769.8 |
| hypothetical protein | EAI98_01350 | Not Available | Negative | 317198 - 319072 | 67336.8 |
| ragb/susd family nutrient uptake outer membrane protein | EAI98_01355 | Not Available | Negative | 319107 - 320615 | 56113.0 |
| tonb-dependent receptor | EAI98_01360 | Not Available | Negative | 320654 - 324196 | 129304.0 |
| duf4974 domain-containing protein | EAI98_01365 | Not Available | Negative | 324354 - 325340 | 36898.9 |
| rna polymerase sigma-70 factor | EAI98_01370 | Not Available | Negative | 325523 - 326059 | 21786.0 |
| tolc family protein | EAI98_01375 | Not Available | Negative | 326493 - 327770 | 47399.7 |
| efflux rnd transporter permease subunit | EAI98_01380 | Not Available | Negative | 327770 - 330820 | 112685.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
