Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EAI98_14810 | Not Available | Negative | 3361315 - 3361593 | 10221.6 |
| para family protein | EAI98_14815 | Not Available | Negative | 3361601 - 3362356 | 27346.7 |
| single-stranded dna-binding protein | EAI98_14820 | Not Available | Negative | 3362476 - 3362922 | 16024.8 |
| deaminase | EAI98_14825 | Not Available | Negative | 3363152 - 3363574 | 16047.5 |
| sigma-54-dependent fis family transcriptional regulator | EAI98_14830 | Not Available | Negative | 3363854 - 3365176 | 49638.1 |
| response regulator | EAI98_14835 | Not Available | Negative | 3365169 - 3365877 | 26085.3 |
| is21 family transposase | EAI98_14840 | Not Available | Positive | 3366094 - 3367638 | 60092.6 |
| atp-binding protein | EAI98_14845 | Not Available | Positive | 3367658 - 3368404 | 28626.5 |
| hypothetical protein | EAI98_14850 | Not Available | Positive | 3369239 - 3371439 | 78804.5 |
| duf4465 domain-containing protein | EAI98_14855 | Not Available | Negative | 3371440 - 3371726 | 10115.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
