Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | EAI98_13980 | Not Available | Positive | 3218469 - 3219725 | 48911.6 |
| hypothetical protein | EAI98_13985 | Not Available | Positive | 3219950 - 3220643 | 25721.6 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | EAI98_13990 | Not Available | Positive | 3220875 - 3222284 | 53068.8 |
| glyoxalase/bleomycin resistance/dioxygenase family protein | EAI98_13995 | Not Available | Positive | 3222281 - 3222670 | 14631.4 |
| duf541 domain-containing protein | EAI98_14000 | Not Available | Positive | 3222745 - 3223431 | 25153.4 |
| cytidine deaminase | EAI98_14005 | Not Available | Positive | 3223669 - 3224124 | 16609.7 |
| rna pseudouridine synthase | EAI98_14010 | Not Available | Positive | 3224228 - 3224914 | 25734.8 |
| d-tyrosyl-trna(tyr) deacylase | EAI98_14015 | Not Available | Positive | 3224928 - 3225383 | 16569.1 |
| dna/rna non-specific endonuclease | EAI98_14020 | Not Available | Positive | 3225398 - 3226921 | 54427.2 |
| tigr01212 family radical sam protein | EAI98_14025 | Not Available | Positive | 3226924 - 3227877 | 36154.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
