Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EAI98_01235 | Not Available | Positive | 289357 - 291174 | 68634.8 |
| s1/p1 nuclease | EAI98_01240 | Not Available | Positive | 291267 - 292064 | 30595.3 |
| helix-turn-helix domain-containing protein | EAI98_01245 | Not Available | Positive | 292456 - 292725 | 10197.4 |
| dna-binding protein | EAI98_01250 | Not Available | Positive | 292727 - 293023 | 11481.9 |
| hypothetical protein | EAI98_01255 | Not Available | Negative | 293051 - 293440 | 15036.1 |
| duf2958 domain-containing protein | EAI98_01260 | Not Available | Negative | 293510 - 293827 | 12499.9 |
| hypothetical protein | EAI98_01265 | Not Available | Positive | 294037 - 294852 | 31557.3 |
| is982 family transposase | EAI98_01270 | Not Available | Negative | 294849 - 295826 | 37342.0 |
| hypothetical protein | EAI98_01275 | Not Available | Positive | 295818 - 296384 | 22076.0 |
| hypothetical protein | EAI98_01280 | Not Available | Negative | 296401 - 296580 | 6834.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
