Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | EAI98_13495 | Not Available | Negative | 3119356 - 3122685 | 123149.0 |
| fecr family protein | EAI98_13500 | Not Available | Negative | 3122868 - 3123833 | 36313.8 |
| rna polymerase sigma-70 factor | EAI98_13505 | Not Available | Positive | 3124014 - 3124589 | 22768.0 |
| mfs transporter | EAI98_13510 | Not Available | Positive | 3124739 - 3126052 | 48039.3 |
| glycosidase | EAI98_13515 | Not Available | Positive | 3126055 - 3127062 | 37906.9 |
| mobilization protein | EAI98_13525 | Not Available | Positive | 3129376 - 3129795 | 16506.2 |
| relaxase | EAI98_13530 | Not Available | Positive | 3129780 - 3131009 | 47139.2 |
| endonuclease/exonuclease/phosphatase family protein | EAI98_13535 | Not Available | Positive | 3132453 - 3133205 | 28891.2 |
| hypothetical protein | EAI98_13540 | Not Available | Negative | 3133778 - 3133981 | 7739.31 |
| gntr family transcriptional regulator | EAI98_13550 | Not Available | Negative | 3134322 - 3135356 | 39249.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
