Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | EAI98_12670 | Not Available | Negative | 2962050 - 2963330 | 46156.9 |
| hypothetical protein | EAI98_12675 | Not Available | Negative | 2963403 - 2964245 | 30357.0 |
| porin family protein | EAI98_12680 | Not Available | Negative | 2964288 - 2965301 | 36391.9 |
| holliday junction branch migration dna helicase ruvb | EAI98_12685 | Not Available | Negative | 2965338 - 2966345 | 36629.2 |
| hypothetical protein | EAI98_12690 | Not Available | Negative | 2966511 - 2967203 | 26228.4 |
| sigma-70 family rna polymerase sigma factor | EAI98_12695 | Not Available | Positive | 2967346 - 2967894 | 21012.0 |
| hypothetical protein | EAI98_12700 | Not Available | Positive | 2967898 - 2969196 | 46355.7 |
| recombinase | EAI98_12705 | Not Available | Positive | 2969652 - 2970983 | 51501.5 |
| hypothetical protein | EAI98_12710 | Not Available | Negative | 2971078 - 2971494 | 15879.9 |
| hypothetical protein | EAI98_12715 | Not Available | Negative | 2971711 - 2972112 | 15622.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
