Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antibiotic acetyltransferase | EAI98_12570 | Not Available | Positive | 2937231 - 2937851 | 23488.1 |
| bifunctional methionine sulfoxide reductase b/a protein | EAI98_12575 | Not Available | Negative | 2938170 - 2939057 | 32998.5 |
| imidazolonepropionase | EAI98_12580 | Not Available | Negative | 2939140 - 2940381 | 44974.5 |
| histidine ammonia-lyase | EAI98_12585 | Not Available | Negative | 2940378 - 2941859 | 54502.6 |
| urocanate hydratase | EAI98_12590 | Not Available | Negative | 2941876 - 2943897 | 75380.7 |
| glutamate formimidoyltransferase | EAI98_12595 | Not Available | Negative | 2943903 - 2945600 | 60622.8 |
| cobalamin receptor | EAI98_12600 | Not Available | Negative | 2945941 - 2947923 | 73071.7 |
| cysteate synthase | EAI98_12605 | Not Available | Negative | 2948384 - 2949691 | 47854.2 |
| carboxynorspermidine decarboxylase | EAI98_12610 | Not Available | Negative | 2949711 - 2950841 | 42521.1 |
| ompa family protein | EAI98_12615 | Not Available | Negative | 2951146 - 2952267 | 39813.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
