Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline--trna ligase | EAI98_11980 | Not Available | Positive | 2804541 - 2806025 | 56439.5 |
| cation transporter | EAI98_11985 | Not Available | Positive | 2806228 - 2807145 | 32851.3 |
| sigma-70 family rna polymerase sigma factor | EAI98_11990 | Not Available | Positive | 2807486 - 2808070 | 22580.3 |
| voc family protein | EAI98_11995 | Not Available | Positive | 2808378 - 2808779 | 14901.8 |
| duf488 domain-containing protein | EAI98_12000 | Not Available | Positive | 2808776 - 2809150 | 14567.4 |
| hypothetical protein | EAI98_12005 | Not Available | Negative | 2809432 - 2810016 | 21188.9 |
| mbl fold metallo-hydrolase | EAI98_12010 | Not Available | Negative | 2810349 - 2811473 | 42481.9 |
| susc/raga family tonb-linked outer membrane protein | EAI98_12015 | Not Available | Positive | 2811774 - 2814809 | 110532.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EAI98_12020 | Not Available | Positive | 2814812 - 2816440 | 60905.7 |
| hypothetical protein | EAI98_12025 | Not Available | Negative | 2816563 - 2816808 | 8723.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
