Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter periplasmic protein lptc | EAI98_11775 | Not Available | Negative | 2751443 - 2752318 | 32488.2 |
| enzyme of heme biosynthesis | EAI98_11780 | Not Available | Negative | 2752322 - 2753656 | 49138.7 |
| hypothetical protein | EAI98_11785 | Not Available | Negative | 2753773 - 2755038 | 46664.8 |
| type iii pantothenate kinase | EAI98_11790 | Not Available | Negative | 2755121 - 2755861 | 27148.9 |
| transcription-repair coupling factor | EAI98_11795 | Not Available | Negative | 2755858 - 2759184 | 124673.0 |
| rne/rng family ribonuclease | EAI98_11800 | Not Available | Negative | 2759189 - 2760739 | 58332.1 |
| integration host factor subunit beta | EAI98_11805 | Not Available | Negative | 2761225 - 2761497 | 9895.18 |
| 3-isopropylmalate dehydratase large subunit | EAI98_11810 | Not Available | Positive | 2761838 - 2762472 | 22438.7 |
| 3-isopropylmalate dehydratase small subunit | EAI98_11815 | Not Available | Positive | 2762485 - 2763078 | 22135.8 |
| 2-isopropylmalate synthase | EAI98_11820 | Not Available | Positive | 2763089 - 2764633 | 57485.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
