Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EAI98_11405 | Not Available | Positive | 2663490 - 2664701 | 43653.4 |
| duf4296 domain-containing protein | EAI98_11410 | Not Available | Positive | 2664698 - 2665525 | 31866.1 |
| cytosine deaminase | EAI98_11415 | Not Available | Positive | 2665485 - 2666633 | 42269.8 |
| rna polymerase sigma-70 factor | EAI98_11425 | Not Available | Positive | 2668687 - 2669343 | 25001.8 |
| duf4974 domain-containing protein | EAI98_11430 | Not Available | Positive | 2669414 - 2670412 | 36900.7 |
| susc/raga family tonb-linked outer membrane protein | EAI98_11435 | Not Available | Positive | 2670538 - 2674095 | 131908.0 |
| ragb/susd family nutrient uptake outer membrane protein | EAI98_11440 | Not Available | Positive | 2674115 - 2675902 | 67872.5 |
| hypothetical protein | EAI98_11445 | Not Available | Positive | 2675931 - 2677241 | 46310.9 |
| ig-like domain-containing protein | EAI98_11450 | Not Available | Positive | 2677259 - 2678605 | 47793.1 |
| site-specific tyrosine recombinase xerd | EAI98_11455 | Not Available | Negative | 2678776 - 2679672 | 34623.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
