Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | EAI98_10820 | Not Available | Positive | 2522754 - 2523977 | 47293.5 |
| recombinase | EAI98_10825 | Not Available | Positive | 2524357 - 2525796 | 54959.9 |
| hypothetical protein | EAI98_10830 | Not Available | Positive | 2527421 - 2528161 | 29153.7 |
| susc/raga family tonb-linked outer membrane protein | EAI98_10835 | Not Available | Positive | 2528621 - 2531653 | 111829.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EAI98_10840 | Not Available | Positive | 2531673 - 2533421 | 65900.0 |
| hypothetical protein | EAI98_10845 | Not Available | Negative | 2534628 - 2535029 | 15114.6 |
| parb/repb/spo0j family partition protein | EAI98_10850 | Not Available | Positive | 2535513 - 2537588 | 78295.2 |
| duf1738 domain-containing protein | EAI98_10855 | Not Available | Positive | 2537659 - 2538648 | 37916.5 |
| duf4121 family protein | EAI98_10860 | Not Available | Positive | 2538717 - 2539616 | 33996.0 |
| hypothetical protein | EAI98_10865 | Not Available | Positive | 2539766 - 2540401 | 24681.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
