Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25/general stress protein ctc | EAI98_10770 | Not Available | Negative | 2515094 - 2515663 | 20520.0 |
| hypothetical protein | EAI98_10775 | Not Available | Positive | 2515663 - 2515860 | 7506.84 |
| rna polymerase sigma factor | EAI98_10780 | Not Available | Positive | 2515870 - 2516430 | 21378.6 |
| hypothetical protein | EAI98_10785 | Not Available | Positive | 2516427 - 2516750 | 12146.5 |
| hypothetical protein | EAI98_10790 | Not Available | Positive | 2516764 - 2518431 | 58903.1 |
| 2-isopropylmalate synthase | EAI98_10795 | Not Available | Positive | 2518776 - 2520296 | 55181.2 |
| 3-isopropylmalate dehydratase large subunit | EAI98_10800 | Not Available | Positive | 2520298 - 2521024 | 26021.3 |
| hypothetical protein | EAI98_10805 | Not Available | Positive | 2521025 - 2521610 | 21721.3 |
| histone h1 | EAI98_10810 | Not Available | Negative | 2521718 - 2521894 | 6422.83 |
| hypothetical protein | EAI98_10815 | Not Available | Negative | 2522086 - 2522427 | 13503.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
