Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nyn domain-containing protein | EAI98_00940 | Not Available | Negative | 226708 - 227268 | 20920.3 |
| nucleotidyltransferase domain-containing protein | EAI98_00945 | Not Available | Positive | 227824 - 228837 | 39286.6 |
| Trna-ser | Not Available | Not Available | Positive | 228923 - 229010 | Not Available |
| hu family dna-binding protein | EAI98_00955 | Not Available | Positive | 229179 - 229439 | 9364.54 |
| pyridoxal phosphate-dependent aminotransferase | EAI98_00960 | Not Available | Positive | 229470 - 230666 | 44768.9 |
| long-chain fatty acid transporter | EAI98_00965 | Not Available | Positive | 230893 - 232359 | 53496.9 |
| Trna-pseudo | Not Available | Not Available | Positive | 232420 - 232494 | Not Available |
| serine dehydratase | EAI98_00970 | Not Available | Positive | 232707 - 233912 | 42975.0 |
| dna-directed rna polymerase subunit beta' | EAI98_00975 | Not Available | Negative | 234489 - 238748 | 157818.0 |
| dna-directed rna polymerase subunit beta | EAI98_00980 | Not Available | Negative | 238785 - 242645 | 144126.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
