Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3987 domain-containing protein | EAI98_10565 | Not Available | Negative | 2469337 - 2469658 | 11772.5 |
| dna-binding protein | EAI98_10570 | Not Available | Negative | 2469661 - 2470014 | 13328.2 |
| hypothetical protein | EAI98_10575 | Not Available | Negative | 2470251 - 2471393 | 43390.2 |
| integrase | EAI98_10580 | Not Available | Negative | 2471464 - 2472795 | 52056.3 |
| integrase | EAI98_10585 | Not Available | Negative | 2472808 - 2474106 | 50622.1 |
| duf3575 domain-containing protein | EAI98_10590 | Not Available | Positive | 2474428 - 2475171 | 28391.9 |
| duf3868 domain-containing protein | EAI98_10595 | Not Available | Positive | 2475184 - 2476602 | 53358.1 |
| hypothetical protein | EAI98_10600 | Not Available | Positive | 2476649 - 2478349 | 63085.4 |
| hypothetical protein | EAI98_10605 | Not Available | Positive | 2478419 - 2479519 | 41011.6 |
| duf4906 domain-containing protein | EAI98_10610 | Not Available | Positive | 2480008 - 2483301 | 123842.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
