Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EAI98_00890 | Not Available | Negative | 212656 - 214320 | 62527.6 |
| tonb-dependent receptor | EAI98_00895 | Not Available | Negative | 214339 - 217248 | 106689.0 |
| hypothetical protein | EAI98_00900 | Not Available | Negative | 217223 - 217531 | 10768.9 |
| s-layer protein | EAI98_00905 | Not Available | Negative | 217580 - 218890 | 49785.4 |
| phosphodiester glycosidase family protein | EAI98_00910 | Not Available | Negative | 218906 - 219934 | 36081.7 |
| duf4492 domain-containing protein | EAI98_00915 | Not Available | Positive | 220392 - 220604 | 8194.36 |
| cytochrome ubiquinol oxidase subunit i | EAI98_00920 | Not Available | Positive | 220615 - 222186 | 58660.4 |
| cytochrome d ubiquinol oxidase subunit ii | EAI98_00925 | Not Available | Positive | 222193 - 223344 | 42708.3 |
| sdr family oxidoreductase | EAI98_00930 | Not Available | Negative | 223406 - 224275 | 31935.0 |
| dead/deah box helicase | EAI98_00935 | Not Available | Positive | 224464 - 226425 | 73226.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
