Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 3 | EAI98_10105 | Not Available | Negative | 2369475 - 2371058 | 59012.6 |
| l-aspartate oxidase | EAI98_10110 | Not Available | Negative | 2371123 - 2372682 | 58062.6 |
| beta-n-acetylhexosaminidase | EAI98_10115 | Not Available | Positive | 2372872 - 2375196 | 85640.6 |
| rna polymerase sigma-70 factor | EAI98_10120 | Not Available | Positive | 2375205 - 2375822 | 23788.9 |
| fecr family protein | EAI98_10125 | Not Available | Positive | 2375929 - 2376897 | 36047.4 |
| susc/raga family tonb-linked outer membrane protein | EAI98_10130 | Not Available | Positive | 2377074 - 2380370 | 122107.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EAI98_10135 | Not Available | Positive | 2380384 - 2381910 | 56251.8 |
| endo-beta-n-acetylglucosaminidase | EAI98_10140 | Not Available | Positive | 2381939 - 2383060 | 41883.2 |
| duf1735 domain-containing protein | EAI98_10145 | Not Available | Positive | 2383087 - 2384256 | 41842.8 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | EAI98_10155 | Not Available | Positive | 2385451 - 2386662 | 45940.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
