Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna processing protein rimm | EAI98_09480 | Not Available | Negative | 2203975 - 2204652 | 24237.9 |
| 30s ribosomal protein s16 | EAI98_09485 | Not Available | Negative | 2204865 - 2205419 | 19671.3 |
| Trna-arg | Not Available | Not Available | Positive | 2205608 - 2205681 | Not Available |
| response regulator | EAI98_09495 | Not Available | Negative | 2205949 - 2206332 | 14729.1 |
| m23 family metallopeptidase | EAI98_09500 | Not Available | Negative | 2206389 - 2208116 | 63648.8 |
| recx family transcriptional regulator | EAI98_09505 | Not Available | Negative | 2208101 - 2208619 | 19911.9 |
| peptide chain release factor n(5)-glutamine methyltransferase | EAI98_09510 | Not Available | Negative | 2208601 - 2209443 | 30315.3 |
| chorismate synthase | EAI98_09515 | Not Available | Negative | 2209443 - 2210417 | 34395.9 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EAI98_09520 | Not Available | Negative | 2210422 - 2211666 | 44448.3 |
| lps export abc transporter atp-binding protein | EAI98_09525 | Not Available | Negative | 2211738 - 2212526 | 29550.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
