Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase | EAI98_09425 | Not Available | Positive | 2193750 - 2195294 | 59711.1 |
| holliday junction resolvase ruvx | EAI98_09430 | Not Available | Positive | 2195305 - 2195718 | 15377.7 |
| peptide deformylase | EAI98_09435 | Not Available | Positive | 2195715 - 2196260 | 20870.0 |
| hypothetical protein | EAI98_09440 | Not Available | Negative | 2196344 - 2196901 | 20819.1 |
| hypothetical protein | EAI98_09445 | Not Available | Negative | 2196948 - 2197469 | 18733.4 |
| porin family protein | EAI98_09450 | Not Available | Negative | 2197529 - 2197996 | 16751.0 |
| pyruvate, phosphate dikinase | EAI98_09455 | Not Available | Negative | 2198186 - 2200915 | 100143.0 |
| hypothetical protein | EAI98_09460 | Not Available | Negative | 2201088 - 2202038 | 35871.4 |
| xre family transcriptional regulator | EAI98_09465 | Not Available | Negative | 2202049 - 2202276 | 8541.5 |
| trna 2-thiouridine(34) synthase mnma | EAI98_09475 | Not Available | Negative | 2202643 - 2203959 | 48269.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
