Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvrb | EAI98_09115 | Not Available | Negative | 2126570 - 2128645 | 78484.5 |
| dna primase | EAI98_09120 | Not Available | Positive | 2128814 - 2130787 | 74372.1 |
| ssra-binding protein smpb | EAI98_09125 | Not Available | Positive | 2130995 - 2131459 | 18043.8 |
| cof-type had-iib family hydrolase | EAI98_09130 | Not Available | Positive | 2131456 - 2132232 | 27687.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | EAI98_09135 | Not Available | Positive | 2132290 - 2132997 | 25481.3 |
| hypothetical protein | EAI98_09140 | Not Available | Positive | 2133013 - 2133579 | 21049.0 |
| duf5110 domain-containing protein | EAI98_09145 | Not Available | Negative | 2133697 - 2136312 | 99739.7 |
| dna recombination protein rmuc | EAI98_09150 | Not Available | Negative | 2136428 - 2137909 | 54968.8 |
| duf4836 family protein | EAI98_09155 | Not Available | Positive | 2138090 - 2139658 | 56166.7 |
| atp-binding cassette domain-containing protein | EAI98_09160 | Not Available | Positive | 2139726 - 2140373 | 23703.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
