Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EAI98_08810 | Not Available | Negative | 2078651 - 2080237 | 58842.4 |
| flagellar biosynthesis protein | EAI98_08815 | Not Available | Positive | 2080555 - 2082495 | 68813.2 |
| hypothetical protein | EAI98_08820 | Not Available | Negative | 2082611 - 2083012 | 15525.6 |
| hypothetical protein | EAI98_08825 | Not Available | Negative | 2083006 - 2083374 | 14101.8 |
| site-specific integrase | EAI98_08830 | Not Available | Positive | 2083723 - 2084958 | 47984.3 |
| rhum protein | EAI98_08835 | Not Available | Positive | 2084971 - 2085333 | 13808.0 |
| dead/deah box helicase | EAI98_08840 | Not Available | Negative | 2085436 - 2087559 | 81757.5 |
| duf1837 domain-containing protein | EAI98_08845 | Not Available | Negative | 2087543 - 2088484 | 36379.3 |
| xre family transcriptional regulator | EAI98_08850 | Not Available | Negative | 2088537 - 2088740 | 7690.41 |
| dna-binding protein | EAI98_08855 | Not Available | Negative | 2088931 - 2089236 | 11817.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
