Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secdf | EAI98_08705 | Not Available | Negative | 2054967 - 2057993 | 109701.0 |
| dmt family transporter | EAI98_08710 | Not Available | Positive | 2058141 - 2059058 | 33344.6 |
| hypothetical protein | EAI98_08715 | Not Available | Positive | 2059077 - 2059895 | 30025.7 |
| alpha-l-fucosidase | EAI98_08720 | Not Available | Positive | 2060029 - 2061333 | 48725.4 |
| molecular chaperone dnak | EAI98_08725 | Not Available | Negative | 2061421 - 2063340 | 69035.7 |
| dna-binding protein | EAI98_08730 | Not Available | Negative | 2064141 - 2064383 | 8842.57 |
| hypothetical protein | EAI98_08735 | Not Available | Negative | 2064556 - 2066145 | 59454.8 |
| hypothetical protein | EAI98_08740 | Not Available | Negative | 2066162 - 2066788 | 22878.8 |
| holliday junction branch migration protein ruva | EAI98_08745 | Not Available | Negative | 2067153 - 2067737 | 20682.1 |
| omph family outer membrane protein | EAI98_08750 | Not Available | Positive | 2067836 - 2068420 | 21366.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
