Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide export protein | EAI98_08605 | Not Available | Positive | 2036795 - 2037592 | 29147.1 |
| polysaccharide biosynthesis tyrosine autokinase | EAI98_08610 | Not Available | Positive | 2037601 - 2040072 | 92656.4 |
| hypothetical protein | EAI98_08615 | Not Available | Positive | 2040074 - 2040463 | 14514.3 |
| nucleotidyltransferase | EAI98_08620 | Not Available | Negative | 2040814 - 2041689 | 32604.5 |
| m23 family metallopeptidase | EAI98_08625 | Not Available | Positive | 2041845 - 2042717 | 32566.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EAI98_08630 | Not Available | Positive | 2042724 - 2043875 | 41489.8 |
| rip metalloprotease rsep | EAI98_08635 | Not Available | Positive | 2043889 - 2045205 | 50142.4 |
| lactate utilization protein | EAI98_08640 | Not Available | Positive | 2045207 - 2045830 | 23252.1 |
| hypothetical protein | EAI98_08645 | Not Available | Positive | 2045844 - 2046512 | 24449.8 |
| dna repair protein rada | EAI98_08650 | Not Available | Positive | 2046523 - 2047890 | 49052.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
