Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubix family flavin prenyltransferase | EAI98_08445 | Not Available | Positive | 1998258 - 1998806 | 19354.4 |
| elongation factor p | EAI98_08450 | Not Available | Positive | 1998867 - 1999433 | 21209.3 |
| hypothetical protein | EAI98_08455 | Not Available | Negative | 1999532 - 2000431 | 33098.9 |
| ragb/susd family nutrient uptake outer membrane protein | EAI98_08460 | Not Available | Negative | 2000443 - 2001927 | 55930.5 |
| tonb-dependent receptor | EAI98_08465 | Not Available | Negative | 2001940 - 2005020 | 114282.0 |
| trehalase | EAI98_08470 | Not Available | Negative | 2005043 - 2006389 | 51549.9 |
| glycoside hydrolase family 97 protein | EAI98_08485 | Not Available | Positive | 2010561 - 2012567 | 75255.8 |
| mfs transporter | EAI98_08490 | Not Available | Positive | 2012571 - 2013908 | 48208.4 |
| arac family transcriptional regulator | EAI98_08495 | Not Available | Positive | 2013918 - 2014811 | 34337.3 |
| beta-mannosidase | EAI98_08500 | Not Available | Positive | 2014836 - 2016041 | 45450.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
