Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | EAI98_08145 | Not Available | Negative | 1922825 - 1924138 | 49587.9 |
| carbohydrate kinase | EAI98_08150 | Not Available | Negative | 1924162 - 1925646 | 53585.7 |
| nudix hydrolase | EAI98_08155 | Not Available | Negative | 1925667 - 1926413 | 28376.5 |
| galactose mutarotase | EAI98_08160 | Not Available | Negative | 1926725 - 1927783 | 39181.1 |
| glutamate--trna ligase | EAI98_08165 | Not Available | Negative | 1927783 - 1929315 | 58130.1 |
| redox-regulated atpase ychf | EAI98_08170 | Not Available | Negative | 1929363 - 1930463 | 40235.3 |
| beta-glucosidase | EAI98_08175 | Not Available | Positive | 1930930 - 1933404 | 90159.8 |
| helix-turn-helix domain-containing protein | EAI98_08180 | Not Available | Negative | 1933589 - 1934767 | 44693.4 |
| alpha-mannosidase | EAI98_08185 | Not Available | Positive | 1935073 - 1937985 | 107618.0 |
| endonuclease/exonuclease/phosphatase family protein | EAI98_08190 | Not Available | Positive | 1937998 - 1938837 | 30754.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
