Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is4 family transposase | EAI98_08045 | Not Available | Negative | 1897116 - 1898219 | 42831.7 |
| hypothetical protein | EAI98_08050 | Not Available | Positive | 1898348 - 1899046 | 26307.0 |
| long-chain fatty acid--coa ligase | EAI98_08055 | Not Available | Negative | 1899220 - 1900920 | 64260.1 |
| glycerol-3-phosphate 1-o-acyltransferase | EAI98_08060 | Not Available | Negative | 1901050 - 1901748 | 25758.3 |
| yitt family protein | EAI98_08065 | Not Available | Positive | 1901882 - 1902871 | 36001.4 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | EAI98_08070 | Not Available | Positive | 1902885 - 1904249 | 50852.9 |
| dead/deah box helicase | EAI98_08075 | Not Available | Positive | 1904266 - 1905774 | 55122.3 |
| ribosome biogenesis gtpase der | EAI98_08080 | Not Available | Negative | 1905996 - 1907300 | 49284.4 |
| cation:proton antiporter | EAI98_08085 | Not Available | Negative | 1907492 - 1909555 | 75630.1 |
| mfs transporter | EAI98_08090 | Not Available | Positive | 1909882 - 1911033 | 40509.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
