Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i glyceraldehyde-3-phosphate dehydrogenase | EAI98_07785 | Not Available | Negative | 1833995 - 1835011 | 36354.5 |
| atp-binding cassette domain-containing protein | EAI98_07790 | Not Available | Negative | 1835129 - 1835884 | 28442.1 |
| abc transporter permease | EAI98_07795 | Not Available | Negative | 1835881 - 1836624 | 26907.9 |
| duf4834 family protein | EAI98_07800 | Not Available | Negative | 1836628 - 1837044 | 15429.1 |
| adenylosuccinate lyase | EAI98_07805 | Not Available | Positive | 1837144 - 1838490 | 50609.7 |
| hypothetical protein | EAI98_07810 | Not Available | Positive | 1838965 - 1840812 | 65334.3 |
| amino acid permease | EAI98_07815 | Not Available | Positive | 1841276 - 1842742 | 52830.0 |
| rna polymerase sigma-70 factor | EAI98_07820 | Not Available | Positive | 1842972 - 1843529 | 21601.1 |
| fecr family protein | EAI98_07825 | Not Available | Positive | 1843665 - 1844660 | 38194.1 |
| tonb-dependent receptor | EAI98_07830 | Not Available | Positive | 1844724 - 1848215 | 129119.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
