Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EAI98_07370 | Not Available | Negative | 1744328 - 1745155 | 30202.3 |
| aspartate kinase | EAI98_07380 | Not Available | Positive | 1747564 - 1748817 | 46771.2 |
| duf4435 domain-containing protein | EAI98_07385 | Not Available | Negative | 1749003 - 1750094 | 42692.6 |
| translation initiation factor | EAI98_07390 | Not Available | Positive | 1750500 - 1750847 | 12835.4 |
| hypothetical protein | EAI98_07395 | Not Available | Positive | 1750848 - 1753820 | 112251.0 |
| penicillin-binding protein | EAI98_07400 | Not Available | Positive | 1753861 - 1756266 | 90451.9 |
| aspartate-semialdehyde dehydrogenase | EAI98_07405 | Not Available | Positive | 1756396 - 1757388 | 36364.9 |
| rna polymerase sigma-70 factor | EAI98_07410 | Not Available | Negative | 1757574 - 1758158 | 22827.3 |
| duf4974 domain-containing protein | EAI98_07415 | Not Available | Positive | 1758679 - 1759635 | 36040.4 |
| susc/raga family tonb-linked outer membrane protein | EAI98_07420 | Not Available | Positive | 1759966 - 1763154 | 117014.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
