Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit secy | EAI98_07055 | Not Available | Positive | 1674630 - 1676006 | 50300.5 |
| type i methionyl aminopeptidase | EAI98_07060 | Not Available | Positive | 1676035 - 1676811 | 28150.8 |
| translation initiation factor if-1 | EAI98_07065 | Not Available | Positive | 1676818 - 1677036 | 8207.17 |
| 50s ribosomal protein l36 | EAI98_07070 | Not Available | Positive | 1677057 - 1677173 | 4496.87 |
| 30s ribosomal protein s13 | EAI98_07075 | Not Available | Positive | 1677211 - 1677591 | 14013.3 |
| 30s ribosomal protein s11 | EAI98_07080 | Not Available | Positive | 1677605 - 1677994 | 13729.8 |
| 30s ribosomal protein s4 | EAI98_07085 | Not Available | Positive | 1678044 - 1678652 | 22624.4 |
| dna-directed rna polymerase subunit alpha | EAI98_07090 | Not Available | Positive | 1678677 - 1679669 | 37000.9 |
| 50s ribosomal protein l17 | EAI98_07095 | Not Available | Positive | 1679672 - 1680277 | 21857.8 |
| sugar phosphate isomerase/epimerase | EAI98_07100 | Not Available | Negative | 1680543 - 1681625 | 38863.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
