Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EAI98_06705 | Not Available | Positive | 1598509 - 1601760 | 121457.0 |
| ragb/susd family nutrient uptake outer membrane protein | EAI98_06710 | Not Available | Positive | 1601772 - 1603334 | 60382.8 |
| duf5017 domain-containing protein | EAI98_06715 | Not Available | Positive | 1603328 - 1603768 | 16035.8 |
| glycoside hydrolase | EAI98_06720 | Not Available | Positive | 1603781 - 1605754 | 73433.6 |
| glycosyl hydrolase family 32 | EAI98_06725 | Not Available | Positive | 1605767 - 1606918 | 43148.8 |
| glycosyl hydrolase family 32 | EAI98_06730 | Not Available | Positive | 1606915 - 1608108 | 44571.1 |
| sialate o-acetylesterase | EAI98_06735 | Not Available | Positive | 1608105 - 1609529 | 52977.3 |
| nucleoside hydrolase | EAI98_06740 | Not Available | Positive | 1609542 - 1610549 | 37317.0 |
| indolepyruvate ferredoxin oxidoreductase | EAI98_06745 | Not Available | Positive | 1610755 - 1612356 | 57334.5 |
| indolepyruvate oxidoreductase subunit beta | EAI98_06750 | Not Available | Positive | 1612438 - 1613022 | 20534.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
