Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | EAI98_06370 | Not Available | Positive | 1518264 - 1518878 | 23708.5 |
| is3 family transposase | EAI98_06375 | Not Available | Positive | 1518758 - 1519390 | 24760.3 |
| hypothetical protein | EAI98_06380 | Not Available | Positive | 1519386 - 1519703 | 12655.1 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | EAI98_06385 | Not Available | Negative | 1520017 - 1521048 | 37808.1 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | EAI98_06390 | Not Available | Negative | 1521053 - 1522897 | 66679.7 |
| hypothetical protein | EAI98_06400 | Not Available | Negative | 1524403 - 1524642 | 8970.43 |
| xre family transcriptional regulator | EAI98_06405 | Not Available | Negative | 1524721 - 1525392 | 24870.2 |
| hypothetical protein | EAI98_06410 | Not Available | Positive | 1525536 - 1525820 | 10749.4 |
| terminase | EAI98_06415 | Not Available | Positive | 1526493 - 1527851 | 51170.6 |
| hypothetical protein | EAI98_06420 | Not Available | Negative | 1527874 - 1528389 | 17941.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
