Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | EAI98_06265 | Not Available | Negative | 1485328 - 1488585 | 118718.0 |
| duf4974 domain-containing protein | EAI98_06270 | Not Available | Negative | 1488872 - 1489882 | 38329.8 |
| rna polymerase sigma-70 factor | EAI98_06275 | Not Available | Positive | 1490005 - 1490589 | 22936.0 |
| duf1573 domain-containing protein | EAI98_06280 | Not Available | Positive | 1490740 - 1491894 | 41278.5 |
| duf1735 domain-containing protein | EAI98_06285 | Not Available | Negative | 1491971 - 1493137 | 42652.6 |
| hypothetical protein | EAI98_06290 | Not Available | Negative | 1493167 - 1494258 | 40717.8 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EAI98_06295 | Not Available | Negative | 1494287 - 1495876 | 58439.5 |
| susc/raga family tonb-linked outer membrane protein | EAI98_06300 | Not Available | Negative | 1495894 - 1499247 | 123323.0 |
| duf4974 domain-containing protein | EAI98_06305 | Not Available | Negative | 1499419 - 1500321 | 34425.3 |
| rna polymerase sigma-70 factor | EAI98_06315 | Not Available | Positive | 1501398 - 1501997 | 23272.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
