Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | EAI98_06065 | Not Available | Negative | 1436374 - 1436904 | 19247.9 |
| tetratricopeptide repeat protein | EAI98_06070 | Not Available | Negative | 1436913 - 1437596 | 24756.4 |
| dna replication and repair protein recf | EAI98_06075 | Not Available | Positive | 1437788 - 1439134 | 49168.3 |
| duf721 domain-containing protein | EAI98_06080 | Not Available | Positive | 1439149 - 1439421 | 10423.7 |
| ompa family protein | EAI98_06085 | Not Available | Negative | 1439771 - 1440970 | 43089.9 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | EAI98_06090 | Not Available | Negative | 1441128 - 1443683 | 95766.9 |
| rida family protein | EAI98_06095 | Not Available | Negative | 1443912 - 1444286 | 13162.0 |
| meta domain-containing protein | EAI98_06100 | Not Available | Positive | 1444364 - 1444792 | 15351.0 |
| malate dehydrogenase | EAI98_06105 | Not Available | Negative | 1444875 - 1445873 | 36270.8 |
| serine/threonine protein phosphatase | EAI98_06110 | Not Available | Negative | 1445917 - 1447029 | 41153.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
