Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dha2 family efflux mfs transporter permease subunit | EAI98_05710 | Not Available | Negative | 1351466 - 1352989 | 54119.2 |
| rna polymerase sigma-70 factor | EAI98_05720 | Not Available | Positive | 1353760 - 1354356 | 23333.2 |
| duf4974 domain-containing protein | EAI98_05725 | Not Available | Positive | 1354444 - 1355445 | 37524.7 |
| susc/raga family tonb-linked outer membrane protein | EAI98_05730 | Not Available | Positive | 1355572 - 1358937 | 123548.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EAI98_05735 | Not Available | Positive | 1358951 - 1360561 | 59921.2 |
| duf1735 domain-containing protein | EAI98_05740 | Not Available | Positive | 1360589 - 1362499 | 70147.0 |
| duf1735 domain-containing protein | EAI98_05745 | Not Available | Positive | 1362530 - 1363687 | 41932.6 |
| beta-n-acetylhexosaminidase | EAI98_05750 | Not Available | Positive | 1363929 - 1365989 | 76923.0 |
| bspa family leucine-rich repeat surface protein | EAI98_05755 | Not Available | Negative | 1366081 - 1369707 | 130416.0 |
| vwa domain-containing protein | EAI98_05760 | Not Available | Negative | 1370039 - 1371061 | 38293.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
