Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase i | EAI98_05460 | Not Available | Positive | 1294200 - 1297076 | 107701.0 |
| porin family protein | EAI98_05465 | Not Available | Negative | 1297230 - 1297862 | 23249.6 |
| duf4136 domain-containing protein | EAI98_05470 | Not Available | Negative | 1297887 - 1298528 | 24487.6 |
| gtp cyclohydrolase i fole | EAI98_05475 | Not Available | Negative | 1298992 - 1299600 | 23456.5 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | EAI98_05480 | Not Available | Negative | 1299682 - 1300263 | 21297.0 |
| haloacid dehalogenase-like hydrolase | EAI98_05485 | Not Available | Negative | 1300329 - 1301168 | 31928.2 |
| nitroreductase | EAI98_05490 | Not Available | Positive | 1301246 - 1301773 | 19382.2 |
| response regulator | EAI98_05495 | Not Available | Negative | 1301787 - 1304936 | 120792.0 |
| single-stranded-dna-specific exonuclease recj | EAI98_05500 | Not Available | Negative | 1305091 - 1306857 | 65840.4 |
| lipoyl(octanoyl) transferase lipb | EAI98_05505 | Not Available | Negative | 1306866 - 1307624 | 27362.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
