Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | EAI98_05350 | Not Available | Positive | 1264433 - 1265320 | 35357.7 |
| mobilization protein | EAI98_05360 | Not Available | Positive | 1265572 - 1266083 | 20215.2 |
| hypothetical protein | EAI98_05370 | Not Available | Positive | 1266398 - 1266895 | 18037.9 |
| hypothetical protein | EAI98_05375 | Not Available | Positive | 1266915 - 1267574 | 25133.7 |
| helicase iv | EAI98_05380 | Not Available | Positive | 1267641 - 1270256 | 100895.0 |
| phospholipase | EAI98_05385 | Not Available | Negative | 1270570 - 1272897 | 86715.5 |
| phenylalanine--trna ligase subunit alpha | EAI98_05390 | Not Available | Positive | 1272970 - 1273995 | 38659.4 |
| tetratricopeptide repeat protein | EAI98_05395 | Not Available | Positive | 1274007 - 1275791 | 67849.6 |
| peptidase | EAI98_05400 | Not Available | Positive | 1275805 - 1276932 | 42806.7 |
| rrna maturation rnase ybey | EAI98_05405 | Not Available | Positive | 1277143 - 1277574 | 16859.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
