Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2851 family protein | EAI98_05295 | Not Available | Negative | 1256343 - 1257302 | 36266.4 |
| duf59 domain-containing protein | EAI98_05300 | Not Available | Negative | 1257304 - 1257624 | 12001.8 |
| sufe family protein | EAI98_05305 | Not Available | Negative | 1257752 - 1258180 | 16037.2 |
| alkaline phosphatase family protein | EAI98_05310 | Not Available | Negative | 1258201 - 1259766 | 57686.2 |
| gscfa family protein | EAI98_05315 | Not Available | Negative | 1259792 - 1260757 | 35711.4 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | EAI98_05320 | Not Available | Positive | 1260791 - 1261603 | 29367.4 |
| rpib/laca/lacb family sugar-phosphate isomerase | EAI98_05325 | Not Available | Negative | 1261928 - 1262383 | 16449.6 |
| duf454 domain-containing protein | EAI98_05330 | Not Available | Positive | 1262487 - 1262852 | 13510.1 |
| dna-binding protein | EAI98_05340 | Not Available | Positive | 1263622 - 1263918 | 11433.9 |
| transposase | EAI98_05345 | Not Available | Positive | 1263990 - 1264502 | 19951.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
