Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF17-16 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703830 bp
Thymine Count
724760 bp
Guanine Count
850545 bp
Cytosine Count
839934 bp
Genome Length
3119159 bp
Protein-coding Genes
2608 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide synthase | DWW79_05640 | Not Available | Negative | 1285790 - 1286926 | 42586.9 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DWW79_05645 | Not Available | Negative | 1286979 - 1287653 | 25499.5 |
| fkbm family methyltransferase | DWW79_05650 | Not Available | Negative | 1287644 - 1288420 | 28795.9 |
| mbl fold metallo-hydrolase | DWW79_05655 | Not Available | Negative | 1288450 - 1289115 | 24370.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DWW79_05660 | Not Available | Positive | 1289186 - 1290604 | 53263.2 |
| duf541 domain-containing protein | DWW79_05665 | Not Available | Positive | 1290655 - 1291353 | 25763.2 |
| transcriptional regulator | DWW79_05670 | Not Available | Positive | 1291350 - 1292021 | 24867.3 |
| cytidine deaminase | DWW79_05675 | Not Available | Positive | 1292033 - 1292494 | 16920.3 |
| rlua family pseudouridine synthase | DWW79_05680 | Not Available | Positive | 1292512 - 1293201 | 26122.3 |
| hypothetical protein | DWW79_05685 | Not Available | Negative | 1293366 - 1295303 | 67609.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
