Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF17-16 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703830 bp
Thymine Count
724760 bp
Guanine Count
850545 bp
Cytosine Count
839934 bp
Genome Length
3119159 bp
Protein-coding Genes
2608 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_00086 | DWW79_00450 | Not Available | Positive | 91806 - 92834 | Not Available |
| deda family protein | DWW79_00455 | Not Available | Positive | 92965 - 93579 | 23041.5 |
| shikimate dehydrogenase | DWW79_00460 | Not Available | Positive | 93581 - 94312 | 26282.4 |
| amp-binding protein | DWW79_00465 | Not Available | Negative | 94439 - 96085 | 61569.0 |
| xre family transcriptional regulator | DWW79_00470 | Not Available | Negative | 96121 - 96702 | 21761.8 |
| Trna-lys | Not Available | Not Available | Positive | 97058 - 97130 | Not Available |
| pseudouridine synthase | DWW79_00480 | Not Available | Negative | 97393 - 98871 | 57522.8 |
| putative c-s lyase | DWW79_00485 | Not Available | Positive | 99008 - 100192 | 44855.5 |
| hepn domain-containing protein | DWW79_00490 | Not Available | Negative | 100274 - 101164 | 35462.2 |
| hypothetical protein | DWW79_00495 | Not Available | Positive | 101656 - 102252 | 22661.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
