Alistipes sp. AF48-12

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. AF48-12 is a Gram-negative bacterium notable for its possession of flagella, which suggests it has motility capabilities. This characteristic may influence its ecological interactions and ability to colonize specific niches within its environment. The organism is characterized by having a single replicon, indicating a streamlined genetic structure that could be reflective of its adaptation strategies or evolutionary history. The accession number associated with Alistipes sp. AF48-12 is QUDJ00000000.1, which serves as a reference for its genomic data. This unique identifier allows for tracking and studying the bacterium's genetic makeup in various biological and ecological contexts. In summary, Alistipes sp. AF48-12 represents a motile, Gram-negative bacterium with a simple genomic architecture. Its traits suggest potential ecological roles that may include interactions with other microorganisms and contributions to nutrient cycling in its habitat. Understanding its biology further may provide insights into its ecological significance and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. AF48-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. AF48-12 AF48-12.Scaf58, whole genome shotgun

Gene Summary

Adenine Count

738885 bp

Thymine Count

711408 bp

Guanine Count

846764 bp

Cytosine Count

866596 bp

Genome Length

3164445 bp

Protein-coding Genes

2493 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cysteine synthase aDW082_04465Not AvailableNegative1021381 - 102232833128.2
pas domain-containing proteinDW082_04470Not AvailableNegative1022460 - 1026242144070.0
sugar phosphate isomerase/epimeraseDW082_04485Not AvailableNegative1028847 - 102968930350.7
had family phosphataseDW082_04495Not AvailableNegative1030926 - 103156424818.2
duf4492 domain-containing proteinDW082_04500Not AvailablePositive1031655 - 10318768994.2
cytochrome ubiquinol oxidase subunit iDW082_04505Not AvailablePositive1031881 - 103349760747.5
cytochrome d ubiquinol oxidase subunit iiDW082_04510Not AvailablePositive1033512 - 103466643060.0
carbohydrate kinaseDW082_04515Not AvailableNegative1034765 - 103564331794.7
abc transporter permeaseDW082_04520Not AvailableNegative1035699 - 103681141160.1
abc transporter permeaseDW082_04525Not AvailableNegative1036814 - 103792040492.9

Displaying genes 811 – 820 of 2543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.