Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes sp. AF48-12
Accession NumberQUDJ00000000.1
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DW082_00395 | Not Available | - | 83158 - 84207 | 40065.2 |
| trna pseudouridine(55) synthase trub | DW082_00400 | Not Available | - | 84326 - 85033 | 26351.9 |
| duf3098 domain-containing protein | DW082_00410 | Not Available | - | 85891 - 86157 | 9870.25 |
| abc transporter permease | DW082_00415 | Not Available | - | 86261 - 87142 | 32616.5 |
| hypothetical protein | DW082_00420 | Not Available | - | 87150 - 89561 | 89312.8 |
| metallophosphatase | DW082_00425 | Not Available | - | 89629 - 90480 | 32194.4 |
| hypothetical protein | DW082_00430 | Not Available | - | 90509 - 91363 | 31904.0 |
| marr family transcriptional regulator | DW082_00435 | Not Available | - | 91368 - 91538 | 6194.65 |
| 50s ribosomal protein l35 | DW082_00440 | Not Available | + | 91792 - 91986 | 7304.2 |
| 50s ribosomal protein l20 | DW082_00445 | Not Available | + | 92085 - 92429 | 12947.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.