Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | DW082_04290 | Not Available | Positive | 974923 - 976215 | 48117.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DW082_04295 | Not Available | Positive | 976218 - 977606 | 50431.6 |
| metallophosphatase | DW082_04305 | Not Available | Positive | 978841 - 979617 | 30325.9 |
| hypothetical protein | DW082_04310 | Not Available | Positive | 979636 - 980991 | 53168.4 |
| xre family transcriptional regulator | DW082_04320 | Not Available | Positive | 981789 - 981992 | 7819.73 |
| restriction endonuclease subunit s | DW082_04330 | Not Available | Positive | 984225 - 985589 | 52392.8 |
| hypothetical protein | DW082_04335 | Not Available | Positive | 986220 - 986501 | 10828.0 |
| hypothetical protein | DW082_04340 | Not Available | Positive | 986681 - 987229 | 20246.6 |
| hypothetical protein | DW082_04345 | Not Available | Positive | 987208 - 987537 | 13063.4 |
| giy-yig nuclease family protein | DW082_04350 | Not Available | Positive | 987540 - 988367 | 31511.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
