Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes sp. AF48-12
Accession NumberQUDJ00000000.1
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod/siga | DW082_00345 | Not Available | + | 73182 - 74042 | 32616.0 |
| 30s ribosomal protein s20 | DW082_00350 | Not Available | - | 74184 - 74435 | 9304.42 |
| Trna-glu | Not Available | Not Available | + | 74466 - 74540 | Not Available |
| hypothetical protein | DW082_00360 | Not Available | - | 74700 - 75131 | 16051.3 |
| pyridoxal phosphate-dependent aminotransferase | DW082_00365 | Not Available | + | 75130 - 76335 | 44869.1 |
| aminoacyl-histidine dipeptidase | DW082_00370 | Not Available | - | 76372 - 77808 | 52230.2 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DW082_00375 | Not Available | + | 77913 - 78374 | 16408.1 |
| type i dna topoisomerase | DW082_00380 | Not Available | - | 78467 - 80770 | 86303.2 |
| duf4270 family protein | DW082_00385 | Not Available | - | 80885 - 82345 | 54298.0 |
| glycogen synthase | DW082_00390 | Not Available | - | 82245 - 83063 | 31831.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.