Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW082_02880 | Not Available | Negative | 670932 - 672002 | 39223.2 |
| abc transporter permease | DW082_02885 | Not Available | Negative | 671990 - 673258 | 47707.1 |
| hlyd family efflux transporter periplasmic adaptor subunit | DW082_02890 | Not Available | Negative | 673301 - 674548 | 47454.7 |
| tolc family protein | DW082_02895 | Not Available | Negative | 674591 - 675916 | 49823.0 |
| sigma-54-dependent fis family transcriptional regulator | DW082_02900 | Not Available | Positive | 676128 - 677483 | 50250.2 |
| pas domain-containing protein | DW082_02905 | Not Available | Positive | 677488 - 678798 | 48494.4 |
| duf4251 domain-containing protein | DW082_02910 | Not Available | Negative | 678801 - 679316 | 18912.6 |
| duf4251 domain-containing protein | DW082_02915 | Not Available | Negative | 679563 - 680057 | 17843.8 |
| chain-length determining protein | DW082_02920 | Not Available | Negative | 680188 - 681270 | 39484.9 |
| formate-dependent phosphoribosylglycinamide formyltransferase | DW082_02925 | Not Available | Positive | 681382 - 682575 | 43849.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
