Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate dehydrogenase subunit vorb | DW082_02375 | Not Available | Positive | 542196 - 543281 | 39659.9 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit gamma | DW082_02385 | Not Available | Positive | 544083 - 544640 | 20202.9 |
| lysm peptidoglycan-binding domain-containing protein | DW082_02390 | Not Available | Positive | 544784 - 545854 | 40247.2 |
| yggs family pyridoxal phosphate-dependent enzyme | DW082_02395 | Not Available | Negative | 545889 - 546575 | 26305.6 |
| aspartate 1-decarboxylase | DW082_02400 | Not Available | Negative | 546699 - 547052 | 12973.7 |
| pantoate--beta-alanine ligase | DW082_02405 | Not Available | Negative | 547229 - 548062 | 30906.1 |
| hypothetical protein | DW082_02415 | Not Available | Positive | 550229 - 551905 | 63630.8 |
| insulinase family protein | DW082_02425 | Not Available | Negative | 552779 - 555610 | 104729.0 |
| peptide chain release factor n(5)-glutamine methyltransferase | DW082_02430 | Not Available | Positive | 555778 - 556617 | 30860.2 |
| recx family transcriptional regulator | DW082_02435 | Not Available | Positive | 556608 - 557105 | 19322.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
