Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | DW082_02220 | Not Available | Positive | 509215 - 511158 | 72077.9 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | DW082_02225 | Not Available | Positive | 511188 - 511931 | 26777.2 |
| nad-dependent epimerase/dehydratase family protein | DW082_02230 | Not Available | Positive | 512204 - 513187 | 36531.2 |
| s9 family peptidase | DW082_02235 | Not Available | Negative | 513243 - 515294 | 76587.8 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DW082_02240 | Not Available | Positive | 515412 - 516233 | 29800.3 |
| biotin--[acetyl-coa-carboxylase] ligase | DW082_02245 | Not Available | Positive | 516240 - 517019 | 28831.2 |
| rna polymerase sigma factor | DW082_02250 | Not Available | Positive | 517084 - 517572 | 19475.4 |
| hypothetical protein | DW082_02255 | Not Available | Positive | 517572 - 518411 | 30335.9 |
| port family protein | DW082_02260 | Not Available | Positive | 518404 - 519246 | 31683.8 |
| hypothetical protein | DW082_02265 | Not Available | Positive | 519282 - 519539 | 9745.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
