Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s1/p1 nuclease | DW082_02055 | Not Available | Positive | 461441 - 462217 | 29480.2 |
| Trna-met | Not Available | Not Available | Positive | 462390 - 462465 | Not Available |
| hypothetical protein | DW082_02065 | Not Available | Positive | 463625 - 463897 | 10732.8 |
| Trna-thr | Not Available | Not Available | Positive | 464326 - 464401 | Not Available |
| glycerophosphodiester phosphodiesterase | DW082_02075 | Not Available | Negative | 464569 - 465336 | 27947.8 |
| ragb/susd family nutrient uptake outer membrane protein | DW082_02080 | Not Available | Negative | 465466 - 467298 | 69757.8 |
| susc/raga family tonb-linked outer membrane protein | DW082_02085 | Not Available | Negative | 467336 - 470509 | 118786.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW082_02090 | Not Available | Negative | 470536 - 472485 | 73917.5 |
| tonb-dependent receptor | DW082_02095 | Not Available | Negative | 472504 - 475746 | 120458.0 |
| hybrid sensor histidine kinase/response regulator | DW082_02100 | Not Available | Positive | 476239 - 480213 | 149732.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
