Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DW082_01515 | Not Available | Negative | 345798 - 346220 | 15549.3 |
| duf4838 domain-containing protein | DW082_01520 | Not Available | Negative | 346346 - 348157 | 68289.3 |
| creatininase family protein | DW082_01525 | Not Available | Negative | 348255 - 349055 | 30019.4 |
| pglz domain-containing protein | DW082_01530 | Not Available | Negative | 349072 - 350625 | 59727.2 |
| hypothetical protein | DW082_01535 | Not Available | Positive | 350693 - 351034 | 13350.2 |
| integration host factor subunit beta | DW082_01540 | Not Available | Positive | 351065 - 351349 | 10295.5 |
| rne/rng family ribonuclease | DW082_01545 | Not Available | Positive | 351633 - 353177 | 58261.3 |
| type iii pantothenate kinase | DW082_01555 | Not Available | Positive | 356606 - 357334 | 26586.9 |
| hypothetical protein | DW082_01560 | Not Available | Positive | 357324 - 358649 | 49592.2 |
| lps export abc transporter periplasmic protein lptc | DW082_01565 | Not Available | Positive | 358668 - 359366 | 26217.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
