Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DW082_13725 | Not Available | Negative | 3088454 - 3088789 | 12619.7 |
| hypothetical protein | DW082_13735 | Not Available | Negative | 3089016 - 3089741 | 28359.0 |
| smi1/knr4 family protein | DW082_13740 | Not Available | Negative | 3090450 - 3090661 | 7835.19 |
| 23s rrna (adenine(2058)-n(6))-methyltransferase erm(f) | DW082_13745 | Not Available | Positive | 3090776 - 3091576 | 30369.4 |
| tetracycline resistance ribosomal protection protein | DW082_13750 | Not Available | Positive | 3091864 - 3093789 | 71991.4 |
| hybrid sensor histidine kinase/response regulator | DW082_13755 | Not Available | Positive | 3093789 - 3096107 | 88209.6 |
| sigma-54-dependent fis family transcriptional regulator | DW082_13760 | Not Available | Positive | 3096100 - 3097422 | 49941.4 |
| deaminase | DW082_13765 | Not Available | Positive | 3097702 - 3098115 | 15780.2 |
| rtec protein | DW082_13770 | Not Available | Positive | 3098326 - 3098943 | 23879.9 |
| atp-dependent dna helicase recg | DW082_13775 | Not Available | Positive | 3099093 - 3100550 | 54715.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
