Alistipes sp. AF48-12

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. AF48-12 is a Gram-negative bacterium notable for its possession of flagella, which suggests it has motility capabilities. This characteristic may influence its ecological interactions and ability to colonize specific niches within its environment. The organism is characterized by having a single replicon, indicating a streamlined genetic structure that could be reflective of its adaptation strategies or evolutionary history. The accession number associated with Alistipes sp. AF48-12 is QUDJ00000000.1, which serves as a reference for its genomic data. This unique identifier allows for tracking and studying the bacterium's genetic makeup in various biological and ecological contexts. In summary, Alistipes sp. AF48-12 represents a motile, Gram-negative bacterium with a simple genomic architecture. Its traits suggest potential ecological roles that may include interactions with other microorganisms and contributions to nutrient cycling in its habitat. Understanding its biology further may provide insights into its ecological significance and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. AF48-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. AF48-12 AF48-12.Scaf58, whole genome shotgun

Gene Summary

Adenine Count

738885 bp

Thymine Count

711408 bp

Guanine Count

846764 bp

Cytosine Count

866596 bp

Genome Length

3164445 bp

Protein-coding Genes

2493 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histone h1DW082_13405Not AvailableNegative3018457 - 30186336604.0
twin-arginine translocation signal domain-containing proteinDW082_13415Not AvailablePositive3020987 - 302239052810.0
duf1893 domain-containing proteinDW082_13420Not AvailablePositive3022428 - 302286216008.5
dead/deah box helicaseDW082_13425Not AvailablePositive3023058 - 302436248070.0
dicarboxylate/amino acid:cation symporterDW082_13430Not AvailablePositive3024512 - 302578044966.7
hypothetical proteinDW082_13435Not AvailablePositive3025852 - 302613310095.4
hypothetical proteinDW082_13440Not AvailablePositive3026130 - 302743149726.6
restriction endonucleaseDW082_13445Not AvailableNegative3027644 - 302861837740.8
hypothetical proteinDW082_13450Not AvailablePositive3028888 - 302935517878.4
hypothetical proteinDW082_13455Not AvailableNegative3029693 - 303004314130.2

Displaying genes 2401 – 2410 of 2543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.